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Prevalence of Rotavirus Genotypes in Children Younger than 5 Years of Age before the Introduction of a Universal Rotavirus Vaccination Program: Report of Rotavirus Surveillance in Turkey
PLoS One 2014 Cilt 9 Sayı 12
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46
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9
Cilt
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Açık Erişim
Özet
Background: Group A rotaviruses are the most common causative agent of acute gastroenteritis among children less than 5 years of age throughout the world. This sentinel surveillance study was aimed to obtain baseline data on the rotavirus G and P genotypes across Turkey before the introduction of a universal rotavirus vaccination program. Methods: Rotavirus antigen-positive samples were collected from 2102 children less than 5 years of age who attended hospitals participating in the Turkish Rotavirus Surveillance Network. Rotavirus antigen was detected in the laboratories of participating hospitals by commercial serological tests such as latex agglutination, immunochromatographic test or enzyme immunoassay. Rotavirus G and P genotypes were determined by reverse transcription polymerase chain reaction (RT-PCR) using consensus primers detecting the VP7 and VP4 genes, followed by semi-nested type-specific multiplex PCR. Results: RT-PCR found rotavirus RNA in 1644 (78.2%) of the samples tested. The highest rate of rotavirus positivity (38.7%) was observed among children in the 13 to 24 month age group, followed by children in the age group of 25 to 36 months (28.3%). A total of eight different G types, six different P types, and 42 different G-P combinations were obtained. Four common G types (G1, G2, G3, and G9) and two common P types (P[8] and P[4]) accounted for 95.1% and 98.8% of the strains, respectively. G9P[8] was the most common G/P combination found in 40.5% of the strains followed by G1P[8] (21.6%), G2P[8] (9.3%), G2P[4] (6.5%), G3P[8] (3.5%), and finally, G4P[8] (3.4%). These six common genotypes included 83.7% of the strains tested in this study. The rate of uncommon genotypes was 14%. Conclusion: The majority of the strains analyzed belonged to the G1-G4 and G9 genotypes, suggesting high coverage of current rotavirus vaccines. This study also demonstrates a dramatic increase in G9 genotype across the country.

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Scimago Dergi Bilgisi Otomatik ISSN Eşleştirmesi 2014 yılı verileri
PLoS ONE
Q1
SJR Quartile
1,559
SJR Skoru
467
H-Index
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Açık Erişim
Kategoriler: Agricultural and Biological Sciences (miscellaneous) (Q1) · Biochemistry, Genetics and Molecular Biology (miscellaneous) (Q1) · Medicine (miscellaneous) (Q1)
Alanlar: Agricultural and Biological Sciences · Biochemistry, Genetics and Molecular Biology · Medicine
Ülke: United States · Public Library of Science
Bu bilgiler makale yılına göre Scimago veritabanından ISSN eşleştirmesiyle otomatik getirilmektedir. Dergi sıralama verileri Scimago'nun ilgili yılı baz alınmaktadır.

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Makale Bilgileri

Dergi PLoS One
ISSN 1932-6203
Yıl 2014 / 12. ay
Cilt / Sayı 9 / 12
Makale Türü Özgün Makale
Hakemlik Hakemli
Endeks SCI-Expanded
Yayın Dili İngilizce
Kapsam Uluslararası
Toplam Yazar 83 kişi
Erişim Türü Elektronik
Alan Sağlık Bilimleri Temel Alanı- Çocuk Enfeksiyon Hastalıkları

YÖKSİS Yazar Kaydı

Yazar Adı DURMAZ RIZA,ÖZTÜRK MEHMET ADNAN,BAYRAM AYŞEN,Çöl Araz Nilgün,Yaşar Ekrem,Bacalan Fatma,ÖZGÜR GÜNDEŞLİOĞLU ÖZLEM,ALTINDİŞ MUSTAFA,BÜKÜLMEZ AYŞEGÜL,ÖNGEN BETİGÜL,SOMER AYPER,KALAYCIOĞLU ATİLA TANER,Bayraktar Banu,DALGIÇ NAZAN,USLU HAKAN,Aktaş Ferda,KILIÇ ÖMER,Çopur ÇiÇEk Aysegul,DERECİ SELİM,AKSARAY SEBAHAT,Nuhoglu Cagatay,Adaleti RIZa,acar sümeyra,BOZDAYI GÜLENDAM,TEZER HASAN,MUTLU DERYA,YILMAZ AYGEN,şekercioğlu Ali Osman,DURMAZ GÜL,HACIMUSTAFAOĞLU MUSTAFA KEMAL,ÖZAKIN CÜNEYT,ÇELEBİ SOLMAZ,TEZCAN ÜLGER SEDA,BAKKALOĞLU ZEKİYE,ASLAN GÖNÜL,ark esin,sözen ebru,TANIR GÖNÜL,ŞENGÜL ÖZKAN,Zararsız HÜlya,ÇELİK ÜMİT,SESLİ ÇETİN EMEL,ÖZEN METEHAN,DEVRİM İLKER,KARAGÖZ ALPER,BAYRAM SÜLEYMAN NURİ,SorguÇ Yelda,İNCE ERDAL,GÜriz Haluk,ALDEMİR KOCABAŞ BİLGE,GÜDÜCÜOĞLU HÜSEYİN,ŞEN SEMRA,TUNCER OĞUZ,AYDIN FARUK,ERDURAN EROL,KORUKLUOĞLU GÜLAY,ÇETİNKAYA ZAFER,VAHABOĞLU MUSTAFA HALUK,Temel KeleŞyan Figen,ANIL MURAT,ULAŞ SAZ EYLEM,ÇİÇEK CANDAN,YILMAZ ÇİFTDOĞAN DİLEK,ŞAHBUDAK ZÜMRÜT,KURUGÖL NURİ ZAFER,EROĞLU CAFER,ERTEK MUSTAFA,GÜZEL AHMET,FEYZİOĞLU BAHADIR,EMİROĞLU MELİKE,YILDIZ ZEYREK FADİLE,ÇAKMAK ALPAY,KOCABAŞ EMİNE,SELİMOĞLU AYŞE,KUZUCU ÇİĞDEM,Soysal Ahmet,BAKIR MUSTAFA,TORUNOĞLU MEHMET ALİ,YAĞCI AYŞEGÜL,UYAR YAVUZ,ÖZLÜ AHMET,Temel Fehminaz,GÖKAHMETOĞLU SELMA
YÖKSİS ID 2998063

Metrikler

Scopus Atıf 46
Havuz Atıfları 0
Yazar Sayısı 83